{
  "_id": "6a1f2468b401979e73420d7e",
  "Package": "nos",
  "Type": "Package",
  "Title": "Compute Node Overlap and Segregation in Ecological Networks",
  "Version": "2.0.0",
  "Author": "Thomas J. Matthews and Giovanni Strona",
  "Maintainer": "Thomas J. Matthews <txm676@gmail.com>",
  "Description": "Calculate NOS (node overlap and segregation) and the\nassociated metrics described in Strona and Veech (2015)\n<DOI:10.1111/2041-210X.12395> and Strona et al. (2017, In\nPress). The functions provided in the package enable assessment\nof structural patterns ranging from complete node segregation\nto perfect nestedness in a variety of network types. In\naddition, they provide a measure of network modularity.",
  "License": "GPL (>= 3)",
  "URL": "https://github.com/txm676/nos",
  "BugReports": "https://github.com/txm676/nos/issues",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.2.3",
  "Config/pak/sysreqs": "libglpk-dev libgmp3-dev libxml2-dev",
  "Repository": "https://txm676.r-universe.dev",
  "Date/Publication": "2024-03-20 13:30:03 UTC",
  "RemoteUrl": "https://github.com/txm676/nos",
  "RemoteRef": "HEAD",
  "RemoteSha": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-16 06:28:09 UTC",
    "User": "root"
  },
  "MD5sum": "0abd93e5e79454588d2e4320ed34c605",
  "_user": "txm676",
  "_type": "src",
  "_file": "nos_2.0.0.tar.gz",
  "_fileid": "f7c7683d4ac8b8e63f54108631508bb691532e4d1d7f6f576539b151e8fab3e8",
  "_filesize": 148025,
  "_sha256": "f7c7683d4ac8b8e63f54108631508bb691532e4d1d7f6f576539b151e8fab3e8",
  "_created": "2026-05-16T06:28:09.000Z",
  "_published": "2026-06-02T18:43:52.814Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79146266247,
      "time": 174,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7031205358"
    },
    {
      "job": 79146266277,
      "time": 170,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7031204980"
    },
    {
      "job": 79146266196,
      "time": 179,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7031252171"
    },
    {
      "job": 79146266064,
      "time": 186,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7031264877"
    },
    {
      "job": 79146265752,
      "time": 196,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7031188541"
    },
    {
      "job": 79146265397,
      "time": 110,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7366795283"
    },
    {
      "job": 79146266094,
      "time": 141,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7031202226"
    },
    {
      "job": 79146266161,
      "time": 116,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7031199747"
    },
    {
      "job": 79146266101,
      "time": 121,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7031200254"
    }
  ],
  "_buildurl": "https://github.com/r-universe/txm676/actions/runs/25954933740",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/txm676/nos",
  "_commit": {
    "id": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
    "author": "txm676 <txm676@gmail.com>",
    "committer": "txm676 <txm676@gmail.com>",
    "message": "updates for CRAN\n",
    "time": 1710941403
  },
  "_maintainer": {
    "name": "Thomas J. Matthews",
    "email": "txm676@gmail.com",
    "login": "txm676",
    "uuid": 24476402
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.1.0",
      "role": "Depends"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "gmp",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "bipartite",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "txm676",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "txm676",
      "count": 43,
      "uuid": 24476402
    }
  ],
  "_userbio": {
    "uuid": 24476402,
    "type": "user",
    "name": "Tom Matthews",
    "description": "Senior research fellow at the University of Birmingham interested in macroecology and biogeography"
  },
  "_downloads": {
    "count": 203,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/nos"
  },
  "_devurl": "https://github.com/txm676/nos",
  "_searchresults": 15,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/nos.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/txm676/nos",
  "_realowner": "txm676",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0.0",
      "date": "2017-05-31"
    },
    {
      "version": "1.1.0",
      "date": "2017-09-11"
    },
    {
      "version": "2.0.0",
      "date": "2024-03-22"
    }
  ],
  "_exports": [
    "freqMat_2_edge",
    "NOSM_bip",
    "NOSM_dir",
    "NOSM_POT_dir",
    "NOSM_POT_undir",
    "NOSM_undir"
  ],
  "_datasets": [
    {
      "name": "boreal",
      "title": "A sample food-web network from the boreal region of the Barents Sea",
      "object": "boreal",
      "class": [
        "data.frame"
      ],
      "fields": [
        "V1",
        "V2"
      ],
      "rows": 1546,
      "table": true,
      "tojson": true
    },
    {
      "name": "testList",
      "title": "Unit tests data",
      "object": "testList",
      "class": [
        "list"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "nos-package",
      "title": "nos: A package for calculating node overlap and segregation in ecological networks",
      "topics": [
        "nos-package"
      ]
    },
    {
      "page": "boreal",
      "title": "A sample food-web network from the boreal region of the Barents Sea",
      "topics": [
        "boreal"
      ]
    },
    {
      "page": "freqMat_2_edge",
      "title": "Convert a frequency interaction matrix to an edge list",
      "topics": [
        "freqMat_2_edge"
      ]
    },
    {
      "page": "NOSM_bip",
      "title": "Compute NOS using a bipartite network",
      "topics": [
        "NOSM_bip"
      ]
    },
    {
      "page": "NOSM_dir",
      "title": "Compute NOS using a directed network without a user provided network of potential interactions",
      "topics": [
        "NOSM_dir"
      ]
    },
    {
      "page": "NOSM_POT_dir",
      "title": "Compute NOS using a directed network and with a user provided network of potential interactions",
      "topics": [
        "NOSM_POT_dir"
      ]
    },
    {
      "page": "NOSM_POT_undir",
      "title": "Compute NOS using an undirected network and with a user provided network of potential interactions",
      "topics": [
        "NOSM_POT_undir"
      ]
    },
    {
      "page": "NOSM_undir",
      "title": "Compute NOS using an undirected network without a user provided network of potential interactions",
      "topics": [
        "NOSM_undir"
      ]
    },
    {
      "page": "summary.NOSM",
      "title": "Summarising the results of the five main NOSM functions",
      "topics": [
        "summary.NOSM"
      ]
    },
    {
      "page": "testList",
      "title": "Unit tests data",
      "topics": [
        "testList"
      ]
    }
  ],
  "_readme": "https://github.com/txm676/nos/raw/HEAD/README.md",
  "_rundeps": [
    "bipartite",
    "cli",
    "cluster",
    "coda",
    "corpcor",
    "cpp11",
    "dotCall64",
    "dplyr",
    "fields",
    "generics",
    "glue",
    "gmp",
    "igraph",
    "lattice",
    "lifecycle",
    "magrittr",
    "maps",
    "MASS",
    "Matrix",
    "mgcv",
    "network",
    "nlme",
    "permute",
    "pillar",
    "pkgconfig",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "sna",
    "spam",
    "statnet.common",
    "tibble",
    "tidyselect",
    "utf8",
    "vctrs",
    "vegan",
    "viridisLite",
    "withr"
  ],
  "_score": 2.8750612633917,
  "_indexed": true,
  "_nocasepkg": "nos",
  "_universes": [
    "txm676"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2.0.0",
      "date": "2026-05-16T06:30:23.000Z",
      "distro": "noble",
      "commit": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
      "fileid": "82c28fefa8960a49ee6e1c6bc8503f3df6bbabfdabb60282e53df9904f9937dc",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/txm676/actions/runs/25954933740"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2.0.0",
      "date": "2026-05-16T06:30:20.000Z",
      "distro": "noble",
      "commit": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
      "fileid": "dfd746ab19aa934ed70f261572eb42d0c9f00230b308b30f71990d84d163482e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/txm676/actions/runs/25954933740"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2.0.0",
      "date": "2026-05-16T06:38:49.000Z",
      "commit": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
      "fileid": "eefeac190a3e682fd4508707cc2b97cc3ffac782211b66e6423655ca4af5ca76",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/txm676/actions/runs/25954933740"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2.0.0",
      "date": "2026-05-16T06:40:28.000Z",
      "commit": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
      "fileid": "2b6c672ad8ac93a40f9030cd9b3f23c0e88c772fb7562febb08607eee616d045",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/txm676/actions/runs/25954933740"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "2.0.0",
      "date": "2026-05-16T06:29:38.000Z",
      "commit": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
      "fileid": "18ec9ce2c7d98d36d6a3e020205c72747e2a98a2ca49ac1970157559f708eb1c",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/txm676/actions/runs/25954933740"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "2.0.0",
      "date": "2026-05-16T06:29:20.000Z",
      "commit": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
      "fileid": "5f50cbbcf2828f43b6a5eb2347b29fe33f8b67ab8dc6f0883fe4ae0c94a53175",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/txm676/actions/runs/25954933740"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "2.0.0",
      "date": "2026-05-16T06:29:21.000Z",
      "commit": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
      "fileid": "1b3416b6e60351c787497afcb6f1d28b888b6a7a1d92470a4509b078a910fb83",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/txm676/actions/runs/25954933740"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "2.0.0",
      "date": "2026-06-02T18:43:29.000Z",
      "commit": "8361c0e3993cf635df38f66a427e1d903d7e0d51",
      "fileid": "f46bda66df61f8aeadf4b39177d7f10796d7ce2bb22dab28d91a4d938480e1f6",
      "status": "success",
      "buildurl": "https://github.com/r-universe/txm676/actions/runs/25954933740"
    }
  ]
}